Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVS-VG---RSVSSAE--------AHQAIGGLLSGGKTVCGV-LRPHELAFLFGESDRDEIGSAAVVSLSF-QGLHGVLAIGSPDPQHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR
3TRC Chain:A ((7-166))
----------------------------------------------------------------------------------LKILRQITQEVNAAPNLEQALKLVVVRLCEALPADACSLFICDDVHGEYVLMATQGLNSKQVGKLRLKFGEGLIGLVGEREEPINLADAPLHPAYKHRPELGEEDYHGFLGIPIIEQGELLGILVIQQLESHHFAEE-EEAFCVTLAIHLAAEIAHARAKG----
General information:
TITO was launched using:
RESULT:
Template:
3TRC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114392 for 1036 contacts (-110.4/contact) +
2D Compatibility (PS) -15511 + (NN) -7695 + (LL) 7636
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -134362.0 ( -129.69 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_3TRC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TRC-query.scw
PDB file :
Tito_Scwrl_3TRC.pdb
: