Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELTTLARPYAKAAFEYAQAHQQLADWSAALGVLAAVSQDDTVRQLLKEPQLTSSAKAQSLIDVCGDKLNAPAQNFVRTVAENKRLELLPTIAEMYEQLKAEQEKSVEVEVTSAFTLSKEQQDKLAKALSARLSREVRLHASEDASLIGGVIIRAGDLVIDG----SVRGKLAKLAEALKS
1KNB Chain:A ((396-454))--------------------------------------------------------------------------------------------------------------------------NDKLTLWTTPAPSPNCRLNAEKDAKLT-LVLTKCGSQILATVSVLAVKGSLAPISGTVQS


General information:
TITO was launched using:
RESULT:

Template: 1KNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5959 for 277 contacts (-21.5/contact) +
2D Compatibility (PS) -5493 + (NN) 3090 + (LL) 10976
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -1036.0 ( -3.74 by residue)
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_1KNB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KNB-query.scw
PDB file : Tito_Scwrl_1KNB.pdb: