Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAELTTLARPYAKAAFEYAQAHQQLADWSAALGVLAAVSQDDTVRQLLKEPQLTSSAKAQSLIDVCGDKLNAPAQNFVRTVAENKRLELLPTIAEMYEQLKAEQEKSVEVEVTSAFTLSKEQQDKLAKALSARLSREVRLHASEDASLIGGVIIRAGDLVIDG----SVRGKLAKLAEALKS |
1KNB Chain:A ((396-454)) | --------------------------------------------------------------------------------------------------------------------------NDKLTLWTTPAPSPNCRLNAEKDAKLT-LVLTKCGSQILATVSVLAVKGSLAPISGTVQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5959 for 277 contacts (-21.5/contact) +
2D Compatibility (PS) -5493 + (NN) 3090 + (LL) 10976
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -1036.0 ( -3.74 by residue)
QMean score : 0.193
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