Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METVVGLTAIAVALLIGLGALGTAIGFGLLGGKFLEGAARQPEMVPMLQVKMFIVAGLLDAVTMIGVGIALFFTFANPFVGQIAG
3V3C Chain:A ((7-79))
-------SVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEDKIRGTLLLSLAFMEALTIYGLVVALALLFANPFV-----
General information:
TITO was launched using:
RESULT:
Template:
3V3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40935 for 421 contacts (-97.2/contact) +
2D Compatibility (PS) -7439 + (NN) -4358 + (LL) 876
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -57606.0 ( -136.83 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_3V3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V3C-query.scw
PDB file :
Tito_Scwrl_3V3C.pdb
: