Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENEFTYEDYETTAKWLLQHTE-YRPQVAVICGSGLGGLTAHLKEAQIFDYNEIPNFPQSTVQGHAGRLVFGLLNGRCCVMMQGRFHMYEGYSLSKVTFPVRVFHLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFCGQNPLRGPNDERFGVRFPAMSDAYDRDMRQKAFTAWKQMGEQRKLQEGTYVMLAGPNFETVAESRLLKMLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVVMDYENLEKANHMEVLDAGKAAAQTLERFVSILMESIPLPDRGS |
| 3ODG Chain:A ((14-285)) | -----FNELPFQAVKYIQKIKPGFKPQIAFILGSGLGDLVDQITNDTTISYADIPGFPVSSVHGHAGELVLGDLCGVPVMCMKGRGHFYEGKGMSIMTNPVRTFKLMGCEFLFCTNAAGSLRPEVLPGSVVMLKDHIN---TMPGTPLVGPNDDRFGPRFFSLANAYDKDLRADMAKIAQQLDI--PLTEGVFVSYPGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITNLAEGL--SDVVLSHEQTLKFAKVASVNFTKLIEAFLKSKA------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ODG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -210096 for 2371 contacts (-88.6/contact) +
2D Compatibility (PS) -29268 + (NN) -14485 + (LL) 608
1D Compatibility (HY) -19600 + (ID) 5500
Total energy: -278341.0 ( -117.39 by residue)
QMean score : 0.469
|
|
|