Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNMSFNCGIVGLPNIGKSTLFNALTQSSAAEAANYPFCTIEPNIGKVPIRDQRLRQIAAIAGSEKVIYNQLEVVDIAGLVKGASKG--EGLGNKFLSHIREVDAIVHLLRCFMDDGVNHVHNEIDPISDAEVVEMELILADIDSIEKRLPQLEKKAKQGNKELKRQLDLMHEVLATLKLGKPARSLECSDRNEMKSLQLLTAKPVMYVCNVEDINIITGNKLSQKVKKIAEENKNKFYCISAKLESDIANLESEEEKQSFLSEFGLQESGLDGVARIMYEVLSMITFFTVGLKEARAWPIKIGSTADKAAGVIHNDFEKGFIKAETISFADYVKYRSESACKDAGKIRFEGKDYIVQDGDIMHFRFNV |
| 2WJG Chain:A ((4-97)) | -HMKSYEIALIGNPNVGKSTIFNALTG-ENVYIGNWPGVTVEKKEGEFEYNG-----------------EKFKVVDLPGVYSLTANSIDEIIARD-YIINEKPDLVVNIVDATALERNLYLTLQLMEMGANLLLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAISIAVKDK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29914 for 578 contacts (-51.8/contact) +
2D Compatibility (PS) -9519 + (NN) 348 + (LL) 16288
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -30047.0 ( -51.98 by residue)
QMean score : 0.275
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