Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIGTACGSGLGSSFMVQMNIESILKDLGVSDVEVEHYDLGGAD--PSAADVWIVGRDLEDSAGHLGDVR---ILNSIIDMDELRELVTGICQEKGLI
1TVM Chain:A ((21-112))
KRKIIVACGGAVATSTMAAEEIKELCQSHNIP-VELIQCRVNEIETYMDGVHLICTTARVDRSFGD-IPLVHGMPFVSGVGIEALQNKILTILQG----
General information:
TITO was launched using:
RESULT:
Template:
1TVM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45095 for 527 contacts (-85.6/contact) +
2D Compatibility (PS) -9631 + (NN) -5084 + (LL) 272
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -65888.0 ( -125.02 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1TVM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TVM-query.scw
PDB file :
Tito_Scwrl_1TVM.pdb
: