Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFYLVRHGKTQWNLEGRFQGANGDSPLLEEAIEELEELGQYLSS--IHFDAVYSSDLGRARDTVNILNDAN---SCPKEIHYTPQLREWALGTLEGCKIATMQAIYPRQM-TAFYQNP------------------------LQFKHDMFGAESLYQTTHRVESFLRSLASK---NYDKVLIVGHGANLTASIRSLLGYQYGSLHYKDKLDNASLTIIETHDFKDFNCLTWNDKSYLRQEVKMTH |
| 3KKK Chain:A ((4-231)) | YTLVLLRHGESTWNKENKFTGW-TDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVLKRAICTAWNVLKTADLLHVP--VVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYDIPPPKLDKEDNRWPGHNVVYKNVPKDAL--PFTECLKDTVERVLPFWFDHIAPDILANKKVMVAAHGNSLRGLVKHLDNLSEADV-LELNIPTGVPLVYELDENLKPIKHYYLL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61664 for 1532 contacts (-40.3/contact) +
2D Compatibility (PS) -20879 + (NN) -2676 + (LL) 1452
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -91367.0 ( -59.64 by residue)
QMean score : 0.414
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