Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MKLAVLGTGMIVK-EVLPVLQKIEGIDLVAILSTV-RSLETAKDLAKEYNMSLATS------EYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLPNFDLVKEHLSN--LGDIKIVECNYSQYSSRYDAFKRGEIAPAFNPEMGGGALRDLNIYNLHLVIGLFGEPITAQYLPNIE-------RGIDTSGVLVLDYGHFKTVCIGAK--DCSAEVKSTIQGDKGSIAILGPTNTMP-KISLTMNGQESHV----YQLNGDRHRMHDEFVIFEGII-SNLDFKRAAQALEHSRTVMKVLDMVTK-------------------- |
| 1OFG Chain:A ((1-381)) | ATLPAGASQVPTTPAGRPMPYAIRPMPEDRRFGYAIVGLGKYALNQILPGFA---GCQHSRIEALVSGNAEKAKIVAAE--YGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQ---WRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHGASSYS-TTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPAN-NQFSAQLDHLAEAVINNK---PVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYVRQGGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206520 for 2542 contacts (-81.2/contact) +
2D Compatibility (PS) -32488 + (NN) -9391 + (LL) 664
1D Compatibility (HY) -9200 + (ID) 3200
Total energy: -260135.0 ( -102.33 by residue)
QMean score : 0.444
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