Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRPLHLVLLSASLAGLLLLGESLFIRREQANNILARVTRANSFLEEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLERRKRSVAQATSSSGEAPDSITWKPYDAADLDPTENPFDLLDFNQTQPERGDNNLTRIVGGQECKDGECPWQALLIN-EENEGFCGGTILSEFYILTAAHCLY--------QAKRFKVRVGDRNTEQEE-GGEAVHEVEVVIKHNRFT-KETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEK----GRQ-STRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDT---KQEDACQGDSGGPHVTRF--KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKAKSHAPEVITSSPLK |
| 3NXP Chain:A ((163-421)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTAN---QPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133502 for 1923 contacts (-69.4/contact) +
2D Compatibility (PS) -25340 + (NN) -3414 + (LL) 12056
1D Compatibility (HY) -20400 + (ID) 4850
Total energy: -175450.0 ( -91.24 by residue)
QMean score : 0.306
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