Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANPLHLVLLGAALAGLLLSGSSVFISRRAANDVLARTRRANSFLEELKKGNLERECMEENCSYEEALEVFEDREKTNEFWNKYVDGDQCESNPCQNQGTCKDGLGMYTCSCVEGYEGQDCEPVTRKLCSLDNGGCDQFCKEEENSVLCSCASGYTLGDNGKSCISTELFPCGKVTLGRWRRSPATNSSEGPPEAPGPEQQDDGNLTATENPFNLLDSPEPPPEDDSSSLVRIVGGQDCRDGECPWQALLVN-EENEGFCGGTILSEYHVLTAAHCLH--------QAKRFKVRVGDRDTEHEE-GNEETHEVEVVVKHNRFV-KETYDFDIAVLRLKTPITFRRNVAPACLPQKDWAESTLMAQKTGIVSGFGRTHEM----GRL-STTLKMLEVPYVDRNSCKRSSSFTITQNMFCAGYDA---RPEDACQGDSGGPHVTRF--RDTYFVTGIVSWGEGCARKGKFGVYTKVSNFLKWIEKSMRARAVPVAEAAGTPGPTQPTIKGSPS |
| 3NXP Chain:A ((163-421)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTAN---QPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117009 for 1923 contacts (-60.8/contact) +
2D Compatibility (PS) -25526 + (NN) -3184 + (LL) 9260
1D Compatibility (HY) -19200 + (ID) 4900
Total energy: -160559.0 ( -83.49 by residue)
QMean score : 0.237
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