Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
4MUZ Chain:A ((18-228))
--------GSHMKQLILALDVMDGEKAMEIAKKVAEHVDRIKVNYPLVLSAGVGIMKRLSE--IKPVIADFKIADVPYTSSLIARIAFENSAESVIVHGFVGSDTLREVCRVAEEFGGKVYAVTELSSPGGEEFMSAVSLKIVEKAKEAGCHGLIAPSTRIERLREIRKAA-GDMEILCPGIGAQKGSIE-AVKYADGIIVGRGIYASGNPAEEARKLRRVLK-----
General information:
TITO was launched using:
RESULT:
Template:
4MUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183748 for 1885 contacts (-97.5/contact) +
2D Compatibility (PS) -22872 + (NN) -7253 + (LL) 1008
1D Compatibility (HY) -18400 + (ID) 4250
Total energy: -235515.0 ( -124.94 by residue)
QMean score : 0.747
(partial model without unconserved sides chains):
PDB file :
Tito_4MUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MUZ-query.scw
PDB file :
Tito_Scwrl_4MUZ.pdb
: