Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDG-FPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWA------------DENGDLGPVYGKQWRAWPT--------PDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI |
| 4G9U Chain:A ((36-313)) | ELNYLNQLKDIIDHGVRKNDRTGIGTLSTFGTQSRYCLRDDIFPLLTTKRVFWRGVVEELLWFISGSTNAKQLSEKNVNIWDGNSSREFLDSRGLYNYEEGDLGPVYGFQWRHFGCPYSSMTADYKGKGYDQLQQCIKMIREEPESRRIIMTAWNPCDLEKVALPPCHCFVQFYVADGELSCQMYQRSADMGLGVPFNIASYSLLTRMIAHITSLKPGFFIHTIGDAHVYLTHVDALKVQMERKPRPFPKLKILRNVENIDDFRAEDFELINYKPYPK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194694 for 1999 contacts (-97.4/contact) +
2D Compatibility (PS) -28056 + (NN) -15817 + (LL) 812
1D Compatibility (HY) -24400 + (ID) 6750
Total energy: -268905.0 ( -134.52 by residue)
QMean score : 0.788
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