Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENGYTYEDYKNTAEWLLSHTK-HRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS |
| 3ODG Chain:A ((14-285)) | -----FNELPFQAVKYIQKIKPGFKPQIAFILGSGLGDLVDQITNDTTISYADIPGFPVSSVHGHAGELVLGDLCGVPVMCMKGRGHFYEGKGMSIMTNPVRTFKLMGCEFLFCTNAAGSLRPEVLPGSVVMLKDHIN---TMPGTPLVGPNDDRFGPRFFSLANAYDKDLRADMAKIAQQLDIP--LTEGVFVSYPGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITNLAEGL--SDVVLSHEQTLKFAKVASVNFTKLIEAFLKSKA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203478 for 2371 contacts (-85.8/contact) +
2D Compatibility (PS) -29418 + (NN) -19196 + (LL) 556
1D Compatibility (HY) -19600 + (ID) 5550
Total energy: -276686.0 ( -116.70 by residue)
QMean score : 0.713
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