Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNLWKKGTDFLGSEFAIMGGAMSWVSERNLVSAISNAGGFGVIACGAM-SSDLLEKEIIETQKLTNKPFGVNLI----TMHPNLSELIDVCIETKVSHIVLAGGLPVKPNIEKIKNVGIEVMCFAPSLSLAKRLVKMGVDALIIEGMEAGGHIGPVSTSVLSQEILPYFKDE-RVPVFVAGGIGRGEMIVNYLEMGASGCQIGTLFVCTNESIAHKNFKEVFIKSAARDAISSVQISADFPVIPVRAIANKASDDFMQYQKEIIDKYHKGQISKEDGQLEIEKFWAGALRGAVIEGDIETGSLMAGQSVGMVDKEKPVKEVIDILIQQASNYIESKSVKVGDLIISKASS |
| 2GJL Chain:A ((3-326)) | VFRT---RFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDP-GEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIP--GLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERS----TDLIMRSLRNTARVARNAISQEVLAIEAR----------GGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228860 for 2851 contacts (-80.3/contact) +
2D Compatibility (PS) -33794 + (NN) -7049 + (LL) 2704
1D Compatibility (HY) -7200 + (ID) 4050
Total energy: -278249.0 ( -97.60 by residue)
QMean score : 0.560
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