Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKRDGEVALFRPEENFKRLNNS--LARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVG--ASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGV-GFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
| 2EJ3 Chain:B ((9-301)) | ------------------------------------------WMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIPFAPE-ELEEAIKEVVR-------RNGYRSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLD--EEGYVAEGSGENLFFVRDGVIYALE-HSVNLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMA------DEVFMTGTAAEVTPVSMIDWRP----IGKGTAGPVALRLREVYLEAVTGRRPEYEGW------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101203 for 2354 contacts (-43.0/contact) +
2D Compatibility (PS) -31342 + (NN) -12383 + (LL) 4740
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -163438.0 ( -69.43 by residue)
QMean score : 0.432
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