Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTE-YELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAFELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGALLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLENNKSTYVSLLGKDGAEDKLTYHRDAAVDELT----QIDEQFNTKHLLEIVDLFYSRDH
3P8L Chain:A ((6-290))------QQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEMETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAFQLLSLSQLG-LSEKVLLMQQLAKAAGNQGMVSGQMGDIEGEKVSLTLEELAAVHEKKTGALIEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATS-----------------STYPALLGIAGAKDALTHQLAEGSAVLEKIKANVPNF-SEEHLANLLTQL-----


General information:
TITO was launched using:
RESULT:

Template: 3P8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94484 for 2160 contacts (-43.7/contact) +
2D Compatibility (PS) -28430 + (NN) -14754 + (LL) 1208
1D Compatibility (HY) -18000 + (ID) 5800
Total energy: -160260.0 ( -74.19 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_3P8L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3P8L-query.scw
PDB file : Tito_Scwrl_3P8L.pdb: