Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGF-GYKWETHEDILDNDAKQQIAEQIQAQF
1Y23 Chain:A ((5-142))
-ENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIPRYGK--GDGFGAVWKTHADDYKPEDLQNISSSIAKRL
General information:
TITO was launched using:
RESULT:
Template:
1Y23.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57637 for 864 contacts (-66.7/contact) +
2D Compatibility (PS) -14670 + (NN) -5183 + (LL) 336
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -92254.0 ( -106.78 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1Y23.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y23-query.scw
PDB file :
Tito_Scwrl_1Y23.pdb
: