Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------MFNQSYLNVYFICGTSDVPSHRTIHEVLEAALKAGITLFQFREKGESALKGNDKLVLAKELQHLCHQYDVPFIVNDDVSLAKEINADGIHVGQDDAKVKEIAQYFTDKIIGLSISDLDEYAKSDLTHVDYIGVGPIYPTPSKHDAHIPVGPEMIATFKEMNPQLPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTVNRFKDFFNN-----
1G67 Chain:A ((1-225))
GIRMTRISREMMKELLSVYFIMGSNNTKA--DPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAIGDMILGVAAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTYKTGR
General information:
TITO was launched using:
RESULT:
Template:
1G67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164024 for 1796 contacts (-91.3/contact) +
2D Compatibility (PS) -23726 + (NN) -20527 + (LL) 144
1D Compatibility (HY) -14000 + (ID) 4350
Total energy: -226483.0 ( -126.10 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_1G67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G67-query.scw
PDB file :
Tito_Scwrl_1G67.pdb
: