Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYL----EENYWYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEF-PEVKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGYQG-EIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK |
| 4HZ8 Chain:A ((4-436)) | ---KFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLK-DPTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVS-AEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPNLPEF------IAPEDMQTISAPI---DFLGVNYYNP--MR------------------VKSSPQPPGIEVVQVESPVTAMGWEIAPEGLYDLLMGITRTYGKL-PIYITENGAAFDDQPDQSGQ-VNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQQRTLKQSAQWYRDV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191865 for 3837 contacts (-50.0/contact) +
2D Compatibility (PS) -44906 + (NN) -11858 + (LL) 684
1D Compatibility (HY) -27600 + (ID) 7650
Total energy: -283195.0 ( -73.81 by residue)
QMean score : 0.653
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