Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLV----HCSQCHGITADGLHGSAQNLLRWDK--EEGIMDTIKHGSKGMDYPAGEMPAI-EMDEKDAKAIASYVMAELSSVKKTKNPQLIDKGKELFESMGCAGCHGNDGKGLQENQVFAADLTTYGTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 4PWA Chain:A ((3-88)) | ------------------------------------------------------------------------------------------------------------------EDKLALGREIFLERSEPQCALCHTLADAEAVGEVGPNLDELKPDAERVNTAVTNGI-------GPMPANEILTDEEIEAVALYVSTVAGKAKN-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39454 for 555 contacts (-71.1/contact) +
2D Compatibility (PS) -8222 + (NN) -1774 + (LL) 13312
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -39588.0 ( -71.33 by residue)
QMean score : 0.317
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