Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPGLHHQEKLLNQCMLSQALKAMGDAELRVFLASVHDDLKGYEEF----LSLCQKPHILALSKIDTATHKQVLQKLQEYQKYSSQFLALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIEEERIDKVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD |
| 2DYK Chain:A ((2-160)) | -----HKVVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVETD-----RGRFLLVDTGGLWSGDKW-EKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKGKPVILVATKVDDPKHELYLGPL---YG--LGFGDPIPTSSEHARGLEELLEAIWERLP--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92477 for 1104 contacts (-83.8/contact) +
2D Compatibility (PS) -15244 + (NN) -3181 + (LL) 12864
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -106988.0 ( -96.91 by residue)
QMean score : 0.514
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