Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKKEKPKMNVLLMGATGVGKSSLINALFGKEITKTGVG-KPITQHLEKYIDEE------------------------KGLILWDTKGIEDK--DYHDTMQSIKK------------------EMEDSFKTLDEKEA-----IDVAYLCVKETSSRVQERERELLSFAKHWNIPTIVVFT-----HTQAEAGDAFVQETKGIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRH-FLSIQRVKIQERKQAMIEEC--KTIIHVASGAAGVAGLIPIPFSDALAIAPIQAGMIYKMNDAFGMDLDKSVGASLVAGLLGVTA--------VAQVGRTLVNGFLKFIPVVGSVAGGATAAVITE-GIGFAYLKVLEKCFNDETGEVNLPGEVGMITSLFKENYLNLDTIKKLKP---------- |
| 2QPT Chain:A ((26-545)) | -----RTVTSSLKELYRTKLLPLEEHYRFGSFHSPALEDADFDGKPMVLVAGQYSTGKTSFIQYLLEQEVPGSRVGPEPTTDCFVAVMHGETEGTVPGNTFLNRFMCAQLPNQVLESISIIDTPGILSRGYDFPAVLRWFAERVDLIILLFDAHKLEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVYIGSFWSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHAYIISYLKKEMPTVFGKENKKKQLILKLPVIFAKIQLEHHISPGDFPDCQKMQELLMAHDFTKFHSLKPKLLEALDDMLAQDIAKLMPLLRQEELESVEAGVAGGAFEGTRMGPFVEWVVTKDKSKYDEIFYNLAPADGKLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHLIEAKLEGHGLPTNLPRRLVPPSKRRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34069 for 2664 contacts (-12.8/contact) +
2D Compatibility (PS) -41085 + (NN) -2810 + (LL) 104
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -90910.0 ( -34.13 by residue)
QMean score : 0.245
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