Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIETKGSIM-YREGCLSVPGFYEEVERFEKVKIEYQNRFAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK
3O3J Chain:A ((1-169))
---MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPG-EGKEIVL--VNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEK
General information:
TITO was launched using:
RESULT:
Template:
3O3J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69812 for 1263 contacts (-55.3/contact) +
2D Compatibility (PS) -18325 + (NN) -7261 + (LL) 1028
1D Compatibility (HY) -14400 + (ID) 3350
Total energy: -112120.0 ( -88.77 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_3O3J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O3J-query.scw
PDB file :
Tito_Scwrl_3O3J.pdb
: