Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQSHQNLQSQFFIEHILQILPHRYPMLLVDRIIELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQTGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
2GLP Chain:B ((21-171))
--------QSQFFIEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
General information:
TITO was launched using:
RESULT:
Template:
2GLP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115603 for 1160 contacts (-99.7/contact) +
2D Compatibility (PS) -15558 + (NN) -1801 + (LL) 664
1D Compatibility (HY) -24000 + (ID) 7450
Total energy: -163748.0 ( -141.16 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_2GLP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GLP-query.scw
PDB file :
Tito_Scwrl_2GLP.pdb
: