Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLNIEGAKLSYQKVGQG-PILIFIPGANGTGDIFLPLAEQLKTSFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDVPVYILGSSSGSIVAMHVLKNHPEVVKKIAFHEPPINTFLPDSEMWQEAN-EKIVQTALT--KNMAEAMQLFGETLHIAPIDAESMSKPAVTIDEVTKDSTTQQMKYWFTYEIRQYTSSNISLDDFKPYVHQITLLNGTDSKGSFPQDVNAFIAKQ-LGLTIVDIPG-GHLGYIQKPAGFAKVLLSIWG |
| 1WOM Chain:A ((4-268)) | ---MTSILSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYD------LNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQ-PDRPEIKEEL-------ESRFCSTD-PVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIA-PATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104457 for 2223 contacts (-47.0/contact) +
2D Compatibility (PS) -27852 + (NN) -17574 + (LL) 1372
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -158861.0 ( -71.46 by residue)
QMean score : 0.343
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