Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVITYGTFDLLHWGHIHLLKRAKALGDYLIVAISSDEFNR-IKHKEAYHSYEHRKLIIEAIRYVDEVIPENNWEQKRDDIEKYGIDVFVMGDDWEGE--F----DFLKDVCEVVYLPRTEGISTSQIKDELK
3ELB Chain:A ((7-170))
AVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKG-PPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML
General information:
TITO was launched using:
RESULT:
Template:
3ELB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67107 for 922 contacts (-72.8/contact) +
2D Compatibility (PS) -13747 + (NN) -5486 + (LL) 64
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -96226.0 ( -104.37 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_3ELB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ELB-query.scw
PDB file :
Tito_Scwrl_3ELB.pdb
: