Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLDKEIKYAFVTGASGEIGQAICMSLARAGWNLYLHYYQNKETVEKLLPLLQAEEVDVILIQ---ADFDDL-ASLTEIEKQVFQLDAFIHAAGHAHYSLFQDTT--------DTNIAELWNVHMFMPMRLIRTFMPKLMKSSQGRIIFISSIWGEVGASMEVAYSTVKGAQIAFCRALSQEVGLSGITVNAVTPGVVETKMMDQFSEEEKDNLRQEIPLNRFAQPEEIAETVAFLTSKKASYITGEVLRLNGGWLM
3VZS Chain:D ((15-256))-----RIAYVTGGMGGIGTAICQRLAKDGFRVVAGCGPNSPRREKWLEQQKALGFDFIASEGNVADWDSTKTAFDKVKSEVGEVDVLINNAGITRDVVFRKMTRADWDAVIDTNLTSLFNV--------TKQVIDGMADRGWGRIVNISSVNGQKGQFGQTNYSTAKAGLHGFTMALAQEVATKGVTVNTVSPGYIATDMVKAIRQDVLDKIVATIPVKRLGLPEEIASICAWLSSEESGFSTGADFSLNGGLHM


General information:
TITO was launched using:
RESULT:

Template: 3VZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179518 for 1885 contacts (-95.2/contact) +
2D Compatibility (PS) -24812 + (NN) -7250 + (LL) 1408
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -228672.0 ( -121.31 by residue)
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_3VZS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VZS-query.scw
PDB file : Tito_Scwrl_3VZS.pdb: