Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEALELRDMASMTNSYTMITSNDWSALGDADVIVMAVGPETLLREDRMEELVETSRSVAEIVPKIIASGFQGIFVNITNPCDVITMLIQKLSGFDHSRVFGTGTSLDTARMRRVVGEALHINPKSVEGYVLGEHGESQFVAWSTVKIGGVSIKDY-----KTTTSLDLPALKDAVRGGGWNILTGKGWTSFGIATAVAGIVDAILTDAKQVFPLAVFSEKT----STYIGQPALIGANGVIDILEPPLTETEKINFNESAEIIKNAFQLI
3VPH Chain:A ((2-304))---KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHP-VWVRAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYRLSALPPGRVVGSGTILDTARFRALLAEHLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVEGVLEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKEA----


General information:
TITO was launched using:
RESULT:

Template: 3VPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209032 for 2578 contacts (-81.1/contact) +
2D Compatibility (PS) -30999 + (NN) -4794 + (LL) 1064
1D Compatibility (HY) -22400 + (ID) 5000
Total energy: -271161.0 ( -105.18 by residue)
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_3VPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VPH-query.scw
PDB file : Tito_Scwrl_3VPH.pdb: