Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVRVLVVDDEDRIRRLLKMYLERENYRIEEASDGDQALSMALNNNYEVILLDLMMPGKDGIEVCRELREFKS-TPVVMLTAKGEEANRVQGFEVGADDYIVKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDGKEIGLTPKEYDLLYYLAKSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSEDAARMIVTVWGLGYKFEVPED
3A0U Chain:A ((3-115))
-----RILVVDDEPNIRELLKEELQEEGYEIDTAENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYRSDLSSW--AADEYVVKSFNFDELKEKVKKLL-----------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63455 for 889 contacts (-71.4/contact) +
2D Compatibility (PS) -12567 + (NN) -11247 + (LL) 8724
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -92045.0 ( -103.54 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_3A0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A0U-query.scw
PDB file :
Tito_Scwrl_3A0U.pdb
: