Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAGILGVGKYVPEKIVTNFDLEKIMDTSDEWIRTRTGIEERRIARDDEYTHDLAYEAAKVAIKNAGLTPDDIDLFIVATVTQEATFPSVANIIQDRLGAKNAAGMDVEAACAGFTFGVVTAAQFIKTGAYKNIVVVGADKLSKITNWDDRTTAVLFGDGAGAVVMGPVSDDHGLLSFDLGSDGSGGKYLNLDENKKIYMNGREVFRFAVRQMGEASLRVLERAGLEKEDLDLLIPHQANIRIMEASRERLNLPEEKLMKTVHKYGNTSSSSIALALVDAVEEGRIKDNDNVLLVGFGGGLTWGALIIRWGK
2EBD Chain:A ((1-309))MGTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIA-KEETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSEDKSDILATRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLRY--


General information:
TITO was launched using:
RESULT:

Template: 2EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201787 for 2923 contacts (-69.0/contact) +
2D Compatibility (PS) -33178 + (NN) -14255 + (LL) -8
1D Compatibility (HY) -30400 + (ID) 7600
Total energy: -287228.0 ( -98.26 by residue)
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_2EBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EBD-query.scw
PDB file : Tito_Scwrl_2EBD.pdb: