Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTKDELYDAMKDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLTQSGLTEKSFKSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVADENKAKEVEQKLKDG-EKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYGYHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKDAFKDFDGSSSSDSDSSK |
3I6C Chain:A ((47-123)) | ----------------------------------------------------------------------------------------------------------------------------------------------------ELINGYIQKIKSGEEDFESLASQFSDCS-SAKARGDLGAFSRGQMQKPFEDASFALR-TGEMSGPVFTDSGIHIILRTE------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I6C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1834 for 472 contacts (3.9/contact) +
2D Compatibility (PS) -8675 + (NN) -9032 + (LL) 13156
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -9717.0 ( -20.59 by residue)
QMean score : 0.716
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