Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLVATAP-RVAVLVEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVERGSKVTEYALGDIVCS-------------------------------------------------------YGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYD-PAQFAMSGVRD-AHVRAGDYVVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTD--VGLEVKRLTGKLGADSIIETSGNAAALQAALRGIAYG-GTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMKYVDQQPDLSIKMGITL |
| 1E3I Chain:A ((9-375)) | CKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCP-TDINATDPKKK------------------------ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSE-AN--LARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTA-GGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE-MTIPTVD-VI-LGRSINGTFFGGW--------KSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDL-MKEGK-SI-RTILT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151019 for 2771 contacts (-54.5/contact) +
2D Compatibility (PS) -33412 + (NN) -10450 + (LL) 2012
1D Compatibility (HY) -8000 + (ID) 3200
Total energy: -204069.0 ( -73.64 by residue)
QMean score : 0.485
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