Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGQYDITGKACIMGILNVTPDSFSDGG-SYTTIDSALNQVGEMLEQGV-----AIVDIGGESTRPGAVFVTAEEEIKRVVPMIKAIREV----YPDLLLSIDTYKTEVAQAALDAGVHILNDVWSGLYDGKMLSLAAER-NVPIILMHN----------------------QEEAVYQ-------DIK------KEVCEFLLERAERALEAGVSKDNIWIDPGFGFAKTEEQNLELLKGLEQVCDLGY----------------PVLFGISRKRTVNYLLGGNREVTERDMGTAALSAWAIAKGCQIVRVHNVEVNKDIVTVISQLV |
2BMB Chain:A ((227-528)) | -------------IMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHIT-KDVDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAIY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130582 for 1945 contacts (-67.1/contact) +
2D Compatibility (PS) -26994 + (NN) -16406 + (LL) 616
1D Compatibility (HY) -20800 + (ID) 5150
Total energy: -199316.0 ( -102.48 by residue)
QMean score : 0.519
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