Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLLEKINETRDFLQAKGVTAPEFGLILGSGLGELAEEIENPIVVDYADIPNWGQSTVVGHAGKLVYGDLSGRKVLALQGRFHFYEGNTMEIVTFPVRIMRALACHSVLVTNAAGGIG--YGPGTLMLIKDHINV---IGTNPLIGENLEEFGPRFPDMSDAYTATYRQKA----HQIAEKQNIKLEEGVYLGVSGPTYETPAEIRAFQTMGAQAVGMSTVPEVIVAAHSGLKVLGISAITN-FAAGFQS--ELNHEEVVEVTQRIKEDFKGLVKSLVAEL |
2A0Y Chain:A ((8-282)) | ----EDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGEQR--ELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANDEEVLAAGKQAAQKLEQFVSILMASI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156543 for 2171 contacts (-72.1/contact) +
2D Compatibility (PS) -27875 + (NN) -8479 + (LL) 736
1D Compatibility (HY) -28000 + (ID) 6350
Total energy: -226511.0 ( -104.33 by residue)
QMean score : 0.556
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