Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKTIYDITIVGGGPVGLFAAFYAGLRGVSVKIIESLSELGGQPAILYPEKKIYDIPGYPVITGRELIDKHIEQLERFKDSIEICLKEEVLSFEKVDDVFTIQTD-KDQHLSRAIVFACGNGAFAPRLLGLENEENYADNNLFYNVTKL-EQFAGKHVVICGGGDSAVDWANELDKIAASVAIVHRRDAFRAHEHSVDI-LKASGVRILTPYVPIGLNGDSQRVSSLVVQKVKGDEVIELPLDNLIVSFGFSTSNKNLRYWNLDYKR-SSINVSSLFETTQEGVYAIGDAANYPGKVELIATGYGEAPVAINQAINYIYPDRDNRVVHSTSLIK |
| 3F8D Chain:A ((12-319)) | -PGEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI---VDDYLGLIEIQASDMIKVFNKHIEKYEVP--VL-LDIVEKIENR--EFVVKTKRKGEFKADSVILGIGV---KRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251803 for 2653 contacts (-94.9/contact) +
2D Compatibility (PS) -32047 + (NN) -5362 + (LL) 1984
1D Compatibility (HY) -16000 + (ID) 3750
Total energy: -306978.0 ( -115.71 by residue)
QMean score : 0.422
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