Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3GHZ Chain:C ((4-159))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMK-
General information:
TITO was launched using:
RESULT:
Template:
3GHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108248 for 1329 contacts (-81.5/contact) +
2D Compatibility (PS) -16863 + (NN) -9380 + (LL) 36
1D Compatibility (HY) -14400 + (ID) 4950
Total energy: -153805.0 ( -115.73 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3GHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GHZ-query.scw
PDB file :
Tito_Scwrl_3GHZ.pdb
: