Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSVYTILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEIKL
3R2C Chain:J ((3-81))
--QEKIRIKLRAYDHRLLDQSVKQIIETVKRTGGVVKGPIPLPTRKSEFS---------------------RILDIIRFTPQTIEALMEISLPAGVDVEVKM
General information:
TITO was launched using:
RESULT:
Template:
3R2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32888 for 530 contacts (-62.1/contact) +
2D Compatibility (PS) -8833 + (NN) -4985 + (LL) 2356
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -56300.0 ( -106.23 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_3R2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2C-query.scw
PDB file :
Tito_Scwrl_3R2C.pdb
: