Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4JL5 Chain:B ((1-203))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHG---NVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPP-PPGV------KVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIG----
General information:
TITO was launched using:
RESULT:
Template:
4JL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88898 for 1568 contacts (-56.7/contact) +
2D Compatibility (PS) -22377 + (NN) -14831 + (LL) 80
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -150826.0 ( -96.19 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_4JL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JL5-query.scw
PDB file :
Tito_Scwrl_4JL5.pdb
: