Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MKKRRKICYCNTALL------LMILLAGCTDSKDGEAQQPSNQASAVQTDEKHTEPEESTKIRKDEAEPITESEESATKAANDTSSAEEKSKEDNVLAAYSSEKIEYARVWLQLGPNQEID-ELNVRHIAAGEPINPNDDTSASYPEN---VTQLAGSRLVDGSVTYHGNGDGTIHVYNVPLRWDSADDIEKGVMREVTESIIKNRKTVYVDTGDDEKIKRLIDIMMIH-
3CP7 Chain:A ((3-218))PADSPHIGKVFFSTNQGDFVCSANIVASANQSTVATAGHCLHDGNG--GQFARNFVFAPAYDYGESEHGVWAAEELVT--------------SAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQELHSCHGTATNDPMGSSTQGIPCNMTGGSSGGPWFLGNGTGGA-----QNSTNSYGYTFLPNVMFGPYFG----SGAQQNYNYASTTN


General information:
TITO was launched using:
RESULT:

Template: 3CP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1081 -35783 -33.10 -184.45
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -33.10
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.170

(partial model without unconserved sides chains):
PDB file : Tito_3CP7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CP7-query.scw
PDB file : Tito_Scwrl_3CP7.pdb: