Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKTNDFMEIMKGRRSIRNYDPAVKISKEEMTEILEEATTAPSSVNAQPWRFLVIDSPEGKEKLAPLASFNQTQVTTSSAVIAVFADMNNADYLEEIYSKAVELGYMPQEVKDRQIAALTAHFEKLPAQVNRETILIDGGLVSMQLMLTARAHGYDTNPIGGYDKENIAETFGLDKERYVPVMLLSIGKAADEG--YASYRLPIDTIAEWK
3BEM Chain:A ((13-218))---MAEFTHLVNERRSASNFLSGHPITKEDLNEMFELVALAPSAFNLQHTKYVTVLDQDVKEKLKQA-ANGQYKVVSSSAVLLVLGDKQAYQQAADIYEGLKVLGILNKQEYDHMVQDTVSFYENRGEQFKRDEAIRNASLSAMMFMLSAAAAGWDTCPMIGFDAEAVKRILNIDDQ-FEVVMMITIGKEKTESRRPRGYRKPVNEFVEYM


General information:
TITO was launched using:
RESULT:

Template: 3BEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 851 -91433 -107.44 -448.20
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -107.44
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_3BEM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BEM-query.scw
PDB file : Tito_Scwrl_3BEM.pdb: