Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSHSQEKIALITGASSQGDIGTAICRKLASQGIHIFFTHWNSDTAWIEEFQQEILRMGVRCEAMKIDLSDAHAAFTIHEKISDKLGYPSILINNAAHSASDNYVSLDAKSLDEHYAVNMRSNFLLCVEFARRFKKSNLISGRIINMTSGQDLGPL--PGELAYAATKGAISAFTRSLSQELAPLGITVNAVNPGPTDSTWMTDEI----RNFLSPKFPMGRIGTPDDAARMIAFLASDEAEWITGQIIHSEGGFIRG
4BO0 Chain:B ((26-266))----QGKVALVTGASR--GIGQAIALELGRLGAVVIGTATSASGA--EKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGI-----------DEWFDVVNTNLNSLYRLSKAVLRGMTKARW--GRIINI--GSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFID-TDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGM---


General information:
TITO was launched using:
RESULT:

Template: 4BO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1216 -149535 -122.97 -667.56
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -122.97
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_4BO0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BO0-query.scw
PDB file : Tito_Scwrl_4BO0.pdb: