Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKTALITGASGGIGKSISETLAARGYNLLLHYNTNQNAAAELAEKLSQMFGVNAEILQADLSAQDGA----DKLTSSIVQPIDAIVLNSGRSHFGLITDVDNATVQEMVQLHVASPYMLTRNLLPGMIRNKSGAIVAVSSIWGETGASCEVLYSMAKGAQHSFVKGLAKELAPSGIRVNAVAPGAVDTNMMNQFTPAEKEEIADEIPIGRLARPQEIADATAFLLSEKASYITGQILSVNGGWHC
4BO0 Chain:D ((28-267))--KVALVTGASRGIGQAIALELGRLGA-VVIGTATSASGAEKIAETL-KANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPL-IVVNNAGI-------RMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMY-


General information:
TITO was launched using:
RESULT:

Template: 4BO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1207 -149306 -123.70 -651.99
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.81

3D Compatibility (PKB) : -123.70
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_4BO0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BO0-query.scw
PDB file : Tito_Scwrl_4BO0.pdb: