Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceKRLVVQRVTEASVTVDEEVVGQIGQGLMVLVGITHDDTEDDAAYLADKVVNLRIFDDSEGKMNLSLVDIGGEILSVSQFTLYGDTKKGRRPNYMNAAKPDKALGLYEKWNDLLREKGIKVETGTFGAMMDVQLTNSGPVTLIMDSK
2DBO Chain:A ((2-146))-RAVIQRVKKSWVEVDGKVVGSINEGLNVFLGVRKGDTEEDIEKLVNKILNLRIFEDERGKFQYSVLDIKGEILVVSQFTLYANVKKGRRPSFEEAEEPKRAKELYEKFVDKIKESGLKVETGIFGAMMDVFIENWGPVTIIIDSR


General information:
TITO was launched using:
RESULT:

Template: 2DBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 703 -80233 -114.13 -553.33
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -114.13
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_2DBO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DBO-query.scw
PDB file : Tito_Scwrl_2DBO.pdb: