Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPN-NSWNHQVFPIDTDTIRAQLATITDGIGVDAMKTGMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDEL-KTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKESFPLNQYVGPTKHSALRLNQQS
4C5K Chain:A ((2-266))-ALKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTW--SHDVTPLPMDVFEKQLETALS-IGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMVCK--DEVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGL-GKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRI---


General information:
TITO was launched using:
RESULT:

Template: 4C5K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1614 16487 10.21 63.17
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : 10.21
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_4C5K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C5K-query.scw
PDB file : Tito_Scwrl_4C5K.pdb: