Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAAGIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP
3K0Z Chain:A ((29-154))
---SQKEATEMVHAAQRFYAF----WDTGKEELIPQTVTENFFDHTLPKGRPQGTEGLKFAAQNFRKIVPN---IHCEIEDLLVVGD--KVTARLSFTGTH--NDKKIDFFAIDILHV-KDGKITEDWHLEDNLTLKQQLG--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3K0Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39732 for 873 contacts (-45.5/contact) +
2D Compatibility (PS) -13835 + (NN) -7166 + (LL) 2344
1D Compatibility (HY) -400 + (ID) 850
Total energy: -59639.0 ( -68.32 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_3K0Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K0Z-query.scw
PDB file :
Tito_Scwrl_3K0Z.pdb
: