Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLG-PEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG |
3OYR Chain:A ((20-343)) | ----------KSGSVDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARL-AGADNDHFQKLAAAVEFIHTATLLHDDVVV---------AAHLIWGGAQSVLVGDFLFARAFELMVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYA-------------------TLPLLLAIARSGP---REAEFWERAIGTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171128 for 2447 contacts (-69.9/contact) +
2D Compatibility (PS) -31816 + (NN) -20855 + (LL) 1428
1D Compatibility (HY) -18000 + (ID) 4750
Total energy: -245121.0 ( -100.17 by residue)
QMean score : 0.634
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