Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVAVLSGAGISAESGVPTFRDDKNGLW---ARFD-PYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAWQDHAEVS-VITQNVDDLHERAG--SGAVHHLHGSLFEFRCARCGVPYTDALPEMPEPAIEVEPPV-----CD-CGGLIRPDIVWFGEPLPE---EPW-------RSAVEATGS-ADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK |
| 2OD2 Chain:A ((40-250)) | -KVIFMVGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDPLPFYTLAKELYPGNFRPSKFHYLLKLFQDKDVLKRVYTQNFDTLERQAGVKDDLIIEAHGSFAHCHCIGCGKVYP---PQVFKSKL-AEHPIKDFVKCDVCGELVKPAIVFFGEDLPDSFSETWLNDSEWLREKITT---QQPLVIVVGTSLAVYPFASLPE----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60669 for 1247 contacts (-48.7/contact) +
2D Compatibility (PS) -19521 + (NN) -9485 + (LL) 3616
1D Compatibility (HY) -16400 + (ID) 3350
Total energy: -105809.0 ( -84.85 by residue)
QMean score : 0.297
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