Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPRRHCR--------RIAVLAAVSIAATVVAG---CSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKI---PGLSLKTLSGDLTTNPTAATGNVKLTLGGS---DIDA----DFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLAN---FADAKA---EGRDTIN-------------GQNTIRISGKVS-----------AQAVNQIAPPFNAT-----------QPVPATVWIQETGDHQLAQA--QLDRGSGNSVQMTLSKWGEKVQVTKPPVS--------- |
| 3P4G Chain:A ((23-323)) | -HSFDHYIGSAFDASNNNVAVTGNVSATLNVLAGDDKVSIDGNVEDVLVAANVAVLDMGTGND----QLYVAGDVLGKIDAGTGNDEIYIKGDVSAAVDAGTGNDEVYIGGNLSGDLDAGTDNDNIQIGGDVNAALNAGTGNDNLIIGH--DVSGIVNMGTDNDTVEVGRTINASGKVLLDTGDDSLLVSGDLFGEVDGGTGNDTIIIAGKVSGNIQGGTGNDIVRVQSQVWAEANISLGTGDDVLIVEHELHGTVAGNEGDDSIYLKFYTKEQYNNNSDLRNRVANF-EHIRVSDGVVKGSPADFADY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23104 for 1740 contacts (-13.3/contact) +
2D Compatibility (PS) -24174 + (NN) -6796 + (LL) 780
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -62844.0 ( -36.12 by residue)
QMean score : 0.155
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