Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTV-TVPGPSGTAIIVVDASAENTVLV--APGANAHLTPVP-SAVANCDVLLTQLEIP-----VATALAAARAAQSADAVVMVNASPAGQD-------RSSLQDLAAIADVVIANEHEANDWPS--------------PPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPA-----ERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS |
| 1TYY Chain:A ((25-328)) | -------------NKVWVIGDASVDLVPEKQ-----------NSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVN-------SFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSR-A---NCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFLS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128951 for 2312 contacts (-55.8/contact) +
2D Compatibility (PS) -29416 + (NN) -20306 + (LL) 1240
1D Compatibility (HY) -10400 + (ID) 3600
Total energy: -191433.0 ( -82.80 by residue)
QMean score : 0.518
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