Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
4OOP Chain:C ((26-152))
-SPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDV--GAGVIDADYRGPVGVILFNHS-DADFEVKFGDRIAQLIIEKIVTPDVVEVDDLD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4OOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91193 for 868 contacts (-105.1/contact) +
2D Compatibility (PS) -14142 + (NN) -8503 + (LL) -112
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -125100.0 ( -144.12 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4OOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOP-query.scw
PDB file :
Tito_Scwrl_4OOP.pdb
: